No. words: 1701; after pruning: 1675


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.4 (1,1:950)  737  0.13 0.00 0.00  BF429193Ld10P078E05P078E111F1_084.ab1       96   845 (0)  C BF429193Ld10P078E05P078E111R1_084.ab1   (0)   856   107 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  374 nodes

 189 str. conn. components

Path
    1    BF429193Ld10P078E05P078E111F1_084.ab1     1 
  367  C BF429193Ld10P078E05P078E111R1_084.ab1   585 
  383    BF429193Ld10P078E05P078E111F1_084.ab1   383 
  407  C BF429193Ld10P078E05P078E111R1_084.ab1   545 
  447    BF429193Ld10P078E05P078E111F1_084.ab1   447 
  451  C BF429193Ld10P078E05P078E111R1_084.ab1   501 
Contig length: old 951, new 951

Contig length: old 951, new 951
New start: 0