No. words: 1403; after pruning: 1363


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.9 (1,1:579)  576  0.00 0.00 0.00  BF429193Ld11P078E05P078E111F1_070.ab1        1   580 (230)  C BF429193Ld11P078E05P078E111R1_070.ab1   (13)   580     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BF429193Ld11P078E05P078E111R1_070.ab1   593 
   65    BF429193Ld11P078E05P078E111F1_070.ab1    52 
  109  C BF429193Ld11P078E05P078E111R1_070.ab1   485 
  341    BF429193Ld11P078E05P078E111F1_070.ab1   328 
  385  C BF429193Ld11P078E05P078E111R1_070.ab1   209 
  549    BF429193Ld11P078E05P078E111F1_070.ab1   536 
  573  C BF429193Ld11P078E05P078E111R1_070.ab1    21 
  577    BF429193Ld11P078E05P078E111F1_070.ab1   564 
Contig length: old 823, new 823

Contig length: old 823, new 823
New start: 0 
S Change at: 726; seg lengths: entry 1, contig 1