No. words: 890; after pruning: 864


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.0 (1,1:398)  382  0.00 0.25 0.00  BF429193Ta16P078E05P116A081F1_044.ab1        1   399 (47)  C BF429193Ta16P078E05P116A081R1_044.ab1   (44)   400     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1  C BF429193Ta16P078E05P116A081R1_044.ab1   444 
  293    BF429193Ta16P078E05P116A081F1_044.ab1   248 
Contig length: old 491, new 491

Contig length: old 491, new 491
New start: 0