No. words: 895; after pruning: 869


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.3 (1,1:402)  388  0.00 0.00 0.00  BF429193Ta18P078E05P116A081F1_042.ab1        2   403 (47)  C BF429193Ta18P078E05P116A081R1_042.ab1   (43)   402     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  202 nodes

 103 str. conn. components

Path
    1  C BF429193Ta18P078E05P116A081R1_042.ab1   445 
   95    BF429193Ta18P078E05P116A081F1_042.ab1    53 
  107  C BF429193Ta18P078E05P116A081R1_042.ab1   339 
  339    BF429193Ta18P078E05P116A081F1_042.ab1   297 
Contig length: old 492, new 492

Contig length: old 492, new 492
New start: 0