No. words: 1822; after pruning: 1782


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.7 (1,1:1470)  335  0.28 0.00 0.00  BF429272Ld02P078F05P078F111F1_008.ab1      547   897 (0)  C BF429272Ld02P078F05P078F111R1_008.ab1   (0)   925   575 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  172 nodes

 88 str. conn. components

Path
    1    BF429272Ld02P078F05P078F111F1_008.ab1     1 
  698  C BF429272Ld02P078F05P078F111R1_008.ab1   774 
  702    BF429272Ld02P078F05P078F111F1_008.ab1   702 
  714  C BF429272Ld02P078F05P078F111R1_008.ab1   758 
  722    BF429272Ld02P078F05P078F111F1_008.ab1   722 
  730  C BF429272Ld02P078F05P078F111R1_008.ab1   742 
Contig length: old 1471, new 1471

Contig length: old 1471, new 1471
New start: 0