No. words: 1803; after pruning: 1777


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.1 (1,1:1526)  265  0.00 0.00 0.00  BF429272Ld03P078F05P078F111F1_006.ab1      614   889 (0)  C BF429272Ld03P078F05P078F111R1_006.ab1   (0)   914   639 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  140 nodes

 72 str. conn. components

Path
    1    BF429272Ld03P078F05P078F111F1_006.ab1     1 
  717  C BF429272Ld03P078F05P078F111R1_006.ab1   811 
  721    BF429272Ld03P078F05P078F111F1_006.ab1   721 
  737  C BF429272Ld03P078F05P078F111R1_006.ab1   791 
  745    BF429272Ld03P078F05P078F111F1_006.ab1   745 
  753  C BF429272Ld03P078F05P078F111R1_006.ab1   775 
  761    BF429272Ld03P078F05P078F111F1_006.ab1   761 
  769  C BF429272Ld03P078F05P078F111R1_006.ab1   759 
  781    BF429272Ld03P078F05P078F111F1_006.ab1   781 
  789  C BF429272Ld03P078F05P078F111R1_006.ab1   739 
Contig length: old 1527, new 1527

Contig length: old 1527, new 1527
New start: 0