No. words: 1824; after pruning: 1798


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:1268)  510  0.54 0.00 0.36  BF429272Sn25P116B08P078F111F1_023.ab1      320   875 (0)  C BF429272Sn25P116B08P078F111R1_023.ab1   (0)   949   396 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  270 nodes

 137 str. conn. components

Path
    1    BF429272Sn25P116B08P078F111F1_023.ab1     1 
  603  C BF429272Sn25P116B08P078F111R1_023.ab1   667 
  607    BF429272Sn25P116B08P078F111F1_023.ab1   607 
  611  C BF429272Sn25P116B08P078F111R1_023.ab1   659 
  627    BF429272Sn25P116B08P078F111F1_023.ab1   627 
  631  C BF429272Sn25P116B08P078F111R1_023.ab1   639 
  643    BF429272Sn25P116B08P078F111F1_023.ab1   643 
  647  C BF429272Sn25P116B08P078F111R1_023.ab1   623 
Contig length: old 1269, new 1269

Contig length: old 1269, new 1269
New start: 0