No. words: 1734; after pruning: 1708


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:1262)  450  0.00 0.00 0.00  BF429272Sn26P116B08P078F111F1_024.ab1      330   800 (0)  C BF429272Sn26P116B08P078F111R1_024.ab1   (0)   934   464 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1    BF429272Sn26P116B08P078F111F1_024.ab1     1 
  567  C BF429272Sn26P116B08P078F111R1_024.ab1   697 
  571    BF429272Sn26P116B08P078F111F1_024.ab1   571 
  587  C BF429272Sn26P116B08P078F111R1_024.ab1   677 
  607    BF429272Sn26P116B08P078F111F1_024.ab1   607 
  611  C BF429272Sn26P116B08P078F111R1_024.ab1   653 
  623    BF429272Sn26P116B08P078F111F1_024.ab1   623 
  631  C BF429272Sn26P116B08P078F111R1_024.ab1   633 
  639    BF429272Sn26P116B08P078F111F1_024.ab1   639 
  643  C BF429272Sn26P116B08P078F111R1_024.ab1   621 
Contig length: old 1263, new 1263

Contig length: old 1263, new 1263
New start: 0