No. words: 1730; after pruning: 1704


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:1257)  451  0.00 0.00 0.00  BF429272Sn29P116B08P078F111F1_019.ab1      355   826 (0)  C BF429272Sn29P116B08P078F111R1_019.ab1   (0)   904   433 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1    BF429272Sn29P116B08P078F111F1_019.ab1     1 
  590  C BF429272Sn29P116B08P078F111R1_019.ab1   669 
  598    BF429272Sn29P116B08P078F111F1_019.ab1   598 
  606  C BF429272Sn29P116B08P078F111R1_019.ab1   653 
Contig length: old 1258, new 1258

Contig length: old 1258, new 1258
New start: 0