No. words: 1728; after pruning: 1702


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:1262)  443  0.00 0.00 0.00  BF429272Sn32P116C08P078F111F1_050.ab1      372   836 (0)  C BF429272Sn32P116C08P078F111R1_050.ab1   (0)   892   428 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1    BF429272Sn32P116C08P078F111F1_050.ab1     1 
  560  C BF429272Sn32P116C08P078F111R1_050.ab1   704 
  564    BF429272Sn32P116C08P078F111F1_050.ab1   564 
  572  C BF429272Sn32P116C08P078F111R1_050.ab1   692 
  588    BF429272Sn32P116C08P078F111F1_050.ab1   588 
  596  C BF429272Sn32P116C08P078F111R1_050.ab1   668 
Contig length: old 1263, new 1263

Contig length: old 1263, new 1263
New start: 0