No. words: 1850; after pruning: 1824


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 10.9 (1,1:1279)  527  0.35 0.18 0.00  BF429272Ta13P116B08P078F111F1_003.ab1      352   916 (0)  C BF429272Ta13P116B08P078F111R1_003.ab1   (4)   930   365 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1    BF429272Ta13P116B08P078F111F1_003.ab1     1 
  625  C BF429272Ta13P116B08P078F111R1_003.ab1   657 
  661    BF429272Ta13P116B08P078F111F1_003.ab1   661 
  665  C BF429272Ta13P116B08P078F111R1_003.ab1   617 
Contig length: old 1280, new 1281

Contig length: old 1281, new 1281
New start: 0