No. words: 1449; after pruning: 1423


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.2 (1,1:1265)  164  1.64 0.00 0.00  BF429272Ta13P116C08P078F111F1_035.ab1      457   639 (0)  C BF429272Ta13P116C08P078F111R1_035.ab1   (0)   810   628 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  82 nodes

 43 str. conn. components

Path
    1    BF429272Ta13P116C08P078F111F1_035.ab1     1 
  488  C BF429272Ta13P116C08P078F111R1_035.ab1   779 
  492    BF429272Ta13P116C08P078F111F1_035.ab1   492 
  524  C BF429272Ta13P116C08P078F111R1_035.ab1   743 
  532    BF429272Ta13P116C08P078F111F1_035.ab1   532 
  536  C BF429272Ta13P116C08P078F111R1_035.ab1   731 
  562    BF429272Ta13P116C08P078F111F1_035.ab1   562 
  566  C BF429272Ta13P116C08P078F111R1_035.ab1   701 
Contig length: old 1266, new 1266

Contig length: old 1266, new 1266
New start: 0