No. words: 1839; after pruning: 1813


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 10.1 (1,1:1274)  514  0.36 0.18 0.36  BF429272Ta14P116B08P078F111F1_004.ab1      332   894 (1)  C BF429272Ta14P116B08P078F111R1_004.ab1   (0)   944   383 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1    BF429272Ta14P116B08P078F111F1_004.ab1     1 
  601  C BF429272Ta14P116B08P078F111R1_004.ab1   675 
  605    BF429272Ta14P116B08P078F111F1_004.ab1   605 
  609  C BF429272Ta14P116B08P078F111R1_004.ab1   667 
Contig length: old 1275, new 1275

Contig length: old 1275, new 1275
New start: 0