No. words: 1768; after pruning: 1742


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.1 (1,1:1250)  485  0.77 0.00 0.00  BF429272Ta14P116C08P078F111F1_036.ab1      389   905 (0)  C BF429272Ta14P116C08P078F111R1_036.ab1   (0)   863   347 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1    BF429272Ta14P116C08P078F111F1_036.ab1     1 
  569  C BF429272Ta14P116C08P078F111R1_036.ab1   683 
  573    BF429272Ta14P116C08P078F111F1_036.ab1   573 
  629  C BF429272Ta14P116C08P078F111R1_036.ab1   623 
Contig length: old 1251, new 1251

Contig length: old 1251, new 1251
New start: 0