No. words: 1442; after pruning: 1402


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.7 (1,1:1273)  159  0.00 0.00 0.00  BF429272Ta15P116C08P078F111F1_033.ab1      514   681 (0)  C BF429272Ta15P116C08P078F111R1_033.ab1   (0)   761   594 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  86 nodes

 45 str. conn. components

Path
    1    BF429272Ta15P116C08P078F111F1_033.ab1     1 
  617  C BF429272Ta15P116C08P078F111R1_033.ab1   658 
  621    BF429272Ta15P116C08P078F111F1_033.ab1   621 
  637  C BF429272Ta15P116C08P078F111R1_033.ab1   638 
  645    BF429272Ta15P116C08P078F111F1_033.ab1   645 
  649  C BF429272Ta15P116C08P078F111R1_033.ab1   626 
  673    BF429272Ta15P116C08P078F111F1_033.ab1   673 
  677  C BF429272Ta15P116C08P078F111R1_033.ab1   598 
Contig length: old 1274, new 1274

Contig length: old 1274, new 1274
New start: 0 
S Change at: 247; seg lengths: entry 1, contig 1