No. words: 1605; after pruning: 1579


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 8.2 (1,1:1194)  381  0.25 0.00 0.25  BF429272Ta17P116B08P078F111F1_031.ab1      294   700 (3)  C BF429272Ta17P116B08P078F111R1_031.ab1   (0)   902   497 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1    BF429272Ta17P116B08P078F111F1_031.ab1     1 
  572  C BF429272Ta17P116B08P078F111R1_031.ab1   625 
Contig length: old 1195, new 1196

Contig length: old 1196, new 1196
New start: 0