No. words: 1788; after pruning: 1762


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.3 (1,1:1274)  487  0.00 0.00 0.19  BF429272Ta21P116C08P078F111F1_059.ab1      383   896 (0)  C BF429272Ta21P116C08P078F111R1_059.ab1   (0)   892   380 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  256 nodes

 130 str. conn. components

Path
    1    BF429272Ta21P116C08P078F111F1_059.ab1     1 
  547  C BF429272Ta21P116C08P078F111R1_059.ab1   729 
  551    BF429272Ta21P116C08P078F111F1_059.ab1   551 
  591  C BF429272Ta21P116C08P078F111R1_059.ab1   685 
  599    BF429272Ta21P116C08P078F111F1_059.ab1   599 
  607  C BF429272Ta21P116C08P078F111R1_059.ab1   669 
  615    BF429272Ta21P116C08P078F111F1_059.ab1   615 
  655  C BF429272Ta21P116C08P078F111R1_059.ab1   621 
Contig length: old 1275, new 1275

Contig length: old 1275, new 1275
New start: 0