No. words: 1684; after pruning: 1658


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:1264)  398  0.00 0.00 0.24  BF429272Ta22P116B08P078F111F1_028.ab1      343   761 (0)  C BF429272Ta22P116B08P078F111R1_028.ab1   (0)   923   506 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1    BF429272Ta22P116B08P078F111F1_028.ab1     1 
  598  C BF429272Ta22P116B08P078F111R1_028.ab1   668 
Contig length: old 1265, new 1265

Contig length: old 1265, new 1265
New start: 0