No. words: 1775; after pruning: 1749


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:1259)  486  0.00 0.19 0.19  BF429272Ta23P116C08P078F111F1_057.ab1      401   915 (0)  C BF429272Ta23P116C08P078F111R1_057.ab1   (0)   860   346 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1    BF429272Ta23P116C08P078F111F1_057.ab1     1 
  580  C BF429272Ta23P116C08P078F111R1_057.ab1   681 
  584    BF429272Ta23P116C08P078F111F1_057.ab1   584 
  596  C BF429272Ta23P116C08P078F111R1_057.ab1   665 
  604    BF429272Ta23P116C08P078F111F1_057.ab1   604 
  620  C BF429272Ta23P116C08P078F111R1_057.ab1   641 
  628    BF429272Ta23P116C08P078F111F1_057.ab1   628 
  636  C BF429272Ta23P116C08P078F111R1_057.ab1   625 
Contig length: old 1260, new 1260

Contig length: old 1260, new 1260
New start: 0