No. words: 1852; after pruning: 1826


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:1268)  553  0.51 0.00 0.00  BF429272Td07P116C08P078F111F1_041.ab1      339   921 (0)  C BF429272Td07P116C08P078F111R1_041.ab1   (0)   931   349 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1    BF429272Td07P116C08P078F111F1_041.ab1     1 
  601  C BF429272Td07P116C08P078F111R1_041.ab1   669 
  605    BF429272Td07P116C08P078F111F1_041.ab1   605 
  617  C BF429272Td07P116C08P078F111R1_041.ab1   653 
  621    BF429272Td07P116C08P078F111F1_041.ab1   621 
  625  C BF429272Td07P116C08P078F111R1_041.ab1   645 
  637    BF429272Td07P116C08P078F111F1_041.ab1   637 
  645  C BF429272Td07P116C08P078F111R1_041.ab1   625 
Contig length: old 1269, new 1269

Contig length: old 1269, new 1269
New start: 0