No. words: 1817; after pruning: 1791


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.6 (1,1:1287)  501  0.19 0.00 0.00  BF429272Td09P116B08P078F111F1_007.ab1      344   872 (0)  C BF429272Td09P116B08P078F111R1_007.ab1   (0)   945   417 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1    BF429272Td09P116B08P078F111F1_007.ab1     1 
  583  C BF429272Td09P116B08P078F111R1_007.ab1   706 
  591    BF429272Td09P116B08P078F111F1_007.ab1   591 
  611  C BF429272Td09P116B08P078F111R1_007.ab1   678 
Contig length: old 1288, new 1288

Contig length: old 1288, new 1288
New start: 0