No. words: 1871; after pruning: 1845


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.8 (1,1:1274)  563  0.17 0.17 0.17  BF429272Td10P116C08P078F111F1_040.ab1      341   936 (0)  C BF429272Td10P116C08P078F111R1_040.ab1   (0)   935   340 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1    BF429272Td10P116C08P078F111F1_040.ab1     1 
  547  C BF429272Td10P116C08P078F111R1_040.ab1   729 
  551    BF429272Td10P116C08P078F111F1_040.ab1   551 
  579  C BF429272Td10P116C08P078F111R1_040.ab1   697 
  583    BF429272Td10P116C08P078F111F1_040.ab1   583 
  587  C BF429272Td10P116C08P078F111R1_040.ab1   689 
  599    BF429272Td10P116C08P078F111F1_040.ab1   599 
  607  C BF429272Td10P116C08P078F111R1_040.ab1   669 
Contig length: old 1275, new 1275

Contig length: old 1275, new 1275
New start: 0