No. words: 1802; after pruning: 1762


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.8 (1,1:1474)  319  0.00 0.00 0.30  BF474023Sn25P034H08P003B111F1_032.ab1      547   874 (0)  C BF474023Sn25P034H08P003B111R1_032.ab1   (0)   928   602 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  162 nodes

 83 str. conn. components

Path
    1    BF474023Sn25P034H08P003B111F1_032.ab1     1 
  630  C BF474023Sn25P034H08P003B111R1_032.ab1   846 
  634    BF474023Sn25P034H08P003B111F1_032.ab1   634 
  658  C BF474023Sn25P034H08P003B111R1_032.ab1   818 
  666    BF474023Sn25P034H08P003B111F1_032.ab1   666 
  702  C BF474023Sn25P034H08P003B111R1_032.ab1   774 
  730    BF474023Sn25P034H08P003B111F1_032.ab1   730 
  734  C BF474023Sn25P034H08P003B111R1_032.ab1   742 
Contig length: old 1475, new 1475

Contig length: old 1475, new 1475
New start: 0 
S Change at: 445; seg lengths: entry 1, contig 1