No. words: 1578; after pruning: 1538


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:1018)  554  0.18 0.00 0.00  BF474023Sn26P088B09P095A121F1_084.ab1      171   729 (0)  C BF474023Sn26P088B09P095A121R1_084.ab1   (0)   849   291 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1    BF474023Sn26P088B09P095A121F1_084.ab1     1 
  521  C BF474023Sn26P088B09P095A121R1_084.ab1   499 
  529    BF474023Sn26P088B09P095A121F1_084.ab1   529 
  537  C BF474023Sn26P088B09P095A121R1_084.ab1   483 
Contig length: old 1019, new 1019

Contig length: old 1019, new 1019
New start: 0