No. words: 1823; after pruning: 1797


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.4 (1,1:1473)  340  0.57 0.00 0.00  BF474023Sn27P034H08P003B111F1_028.ab1      554   902 (0)  C BF474023Sn27P034H08P003B111R1_028.ab1   (0)   921   573 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  170 nodes

 87 str. conn. components

Path
    1    BF474023Sn27P034H08P003B111F1_028.ab1     1 
  681  C BF474023Sn27P034H08P003B111R1_028.ab1   794 
  685    BF474023Sn27P034H08P003B111F1_028.ab1   685 
  709  C BF474023Sn27P034H08P003B111R1_028.ab1   766 
  738    BF474023Sn27P034H08P003B111F1_028.ab1   738 
  746  C BF474023Sn27P034H08P003B111R1_028.ab1   729 
  750    BF474023Sn27P034H08P003B111F1_028.ab1   750 
  754  C BF474023Sn27P034H08P003B111R1_028.ab1   721 
  778    BF474023Sn27P034H08P003B111F1_028.ab1   778 
  782  C BF474023Sn27P034H08P003B111R1_028.ab1   693 
Contig length: old 1474, new 1474

Contig length: old 1474, new 1474
New start: 0