No. words: 1539; after pruning: 1499


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.5 (1,1:1459)   71  2.53 0.00 0.00  BF474023Sn28P034H08P003B111F1_026.ab1      540   618 (0)  C BF474023Sn28P034H08P003B111R1_026.ab1   (0)   921   843 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  32 nodes

 18 str. conn. components

Path
    1    BF474023Sn28P034H08P003B111F1_026.ab1     1 
  551  C BF474023Sn28P034H08P003B111R1_026.ab1   910 
  559    BF474023Sn28P034H08P003B111F1_026.ab1   559 
  571  C BF474023Sn28P034H08P003B111R1_026.ab1   890 
Contig length: old 1460, new 1460

Contig length: old 1460, new 1460
New start: 0 
S Change at: 522; seg lengths: entry 1, contig 1