No. words: 1901; after pruning: 1875


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:1479)  415  0.00 0.00 0.00  BF474023Ta11P034H08P003B111F1_012.ab1      504   924 (0)  C BF474023Ta11P034H08P003B111R1_012.ab1   (0)   977   557 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  212 nodes

 108 str. conn. components

Path
    1    BF474023Ta11P034H08P003B111F1_012.ab1     1 
  715  C BF474023Ta11P034H08P003B111R1_012.ab1   766 
  727    BF474023Ta11P034H08P003B111F1_012.ab1   727 
  731  C BF474023Ta11P034H08P003B111R1_012.ab1   750 
  739    BF474023Ta11P034H08P003B111F1_012.ab1   739 
  743  C BF474023Ta11P034H08P003B111R1_012.ab1   738 
  763    BF474023Ta11P034H08P003B111F1_012.ab1   763 
  767  C BF474023Ta11P034H08P003B111R1_012.ab1   714 
Contig length: old 1480, new 1480

Contig length: old 1480, new 1480
New start: 0