No. words: 1667; after pruning: 1627


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.2 (1,1:1037)  614  0.16 0.16 0.16  BF474023Ta11P088B09P095A121F1_080.ab1      186   814 (0)  C BF474023Ta11P088B09P095A121R1_080.ab1   (0)   853   225 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1    BF474023Ta11P088B09P095A121F1_080.ab1     1 
  419  C BF474023Ta11P088B09P095A121R1_080.ab1   620 
  435    BF474023Ta11P088B09P095A121F1_080.ab1   435 
  507  C BF474023Ta11P088B09P095A121R1_080.ab1   532 
  519    BF474023Ta11P088B09P095A121F1_080.ab1   519 
  531  C BF474023Ta11P088B09P095A121R1_080.ab1   508 
Contig length: old 1038, new 1038

Contig length: old 1038, new 1038
New start: 0