No. words: 1710; after pruning: 1684


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.5 (1,1:1050)  651  0.15 0.00 0.00  BF474023Ta12P088B09P095A121F1_095.ab1      198   856 (0)  C BF474023Ta12P088B09P095A121R1_095.ab1   (0)   854   196 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  328 nodes

 166 str. conn. components

Path
    1    BF474023Ta12P088B09P095A121F1_095.ab1     1 
  549  C BF474023Ta12P088B09P095A121R1_095.ab1   503 
  553    BF474023Ta12P088B09P095A121F1_095.ab1   553 
  569  C BF474023Ta12P088B09P095A121R1_095.ab1   483 
Contig length: old 1051, new 1051

Contig length: old 1051, new 1051
New start: 0