No. words: 1777; after pruning: 1723


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.8 (1,1:1463)  306  0.00 0.00 0.32  BF474023Ta17P034H08P003B111F1_031.ab1      593   906 (0)  C BF474023Ta17P034H08P003B111R1_031.ab1   (0)   871   559 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  154 nodes

 79 str. conn. components

Path
    1    BF474023Ta17P034H08P003B111F1_031.ab1     1 
  710  C BF474023Ta17P034H08P003B111R1_031.ab1   755 
  718    BF474023Ta17P034H08P003B111F1_031.ab1   718 
  722  C BF474023Ta17P034H08P003B111R1_031.ab1   743 
  726    BF474023Ta17P034H08P003B111F1_031.ab1   726 
  730  C BF474023Ta17P034H08P003B111R1_031.ab1   735 
  766    BF474023Ta17P034H08P003B111F1_031.ab1   766 
  774  C BF474023Ta17P034H08P003B111R1_031.ab1   691 
  834    BF474023Ta17P034H08P003B111F1_031.ab1   834 
  838  C BF474023Ta17P034H08P003B111R1_031.ab1   627 
Contig length: old 1464, new 1464

Contig length: old 1464, new 1464
New start: 0 
S Change at: 444; seg lengths: entry 1, contig 1
S Change at: 519; seg lengths: entry 1, contig 1