No. words: 1668; after pruning: 1628


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.0 (1,1:1029)  610  0.79 0.31 0.00  BF474023Ta17P088B09P095A121F1_074.ab1      252   887 (0)  C BF474023Ta17P088B09P095A121R1_074.ab1   (0)   781   144 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1    BF474023Ta17P088B09P095A121F1_074.ab1     1 
  620  C BF474023Ta17P088B09P095A121R1_074.ab1   412 
  624    BF474023Ta17P088B09P095A121F1_074.ab1   624 
  632  C BF474023Ta17P088B09P095A121R1_074.ab1   400 
  636    BF474023Ta17P088B09P095A121F1_074.ab1   636 
  640  C BF474023Ta17P088B09P095A121R1_074.ab1   392 
  648    BF474023Ta17P088B09P095A121F1_074.ab1   648 
  652  C BF474023Ta17P088B09P095A121R1_074.ab1   380 
  672    BF474023Ta17P088B09P095A121F1_074.ab1   672 
  676  C BF474023Ta17P088B09P095A121R1_074.ab1   356 
  798    BF474023Ta17P088B09P095A121F1_074.ab1   798 
  810  C BF474023Ta17P088B09P095A121R1_074.ab1   222 
  818    BF474023Ta17P088B09P095A121F1_074.ab1   818 
  822  C BF474023Ta17P088B09P095A121R1_074.ab1   210 
Contig length: old 1030, new 1031

Contig length: old 1031, new 1031
New start: 0