No. words: 1830; after pruning: 1790


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.5 (1,1:1480)  335  0.29 0.29 0.29  BF474023Ta21P034H08P003B111F1_023.ab1      563   911 (0)  C BF474023Ta21P034H08P003B111R1_023.ab1   (0)   919   571 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  164 nodes

 84 str. conn. components

Path
    1    BF474023Ta21P034H08P003B111F1_023.ab1     1 
  691  C BF474023Ta21P034H08P003B111R1_023.ab1   792 
  703    BF474023Ta21P034H08P003B111F1_023.ab1   703 
  711  C BF474023Ta21P034H08P003B111R1_023.ab1   772 
  715    BF474023Ta21P034H08P003B111F1_023.ab1   715 
  719  C BF474023Ta21P034H08P003B111R1_023.ab1   764 
  747    BF474023Ta21P034H08P003B111F1_023.ab1   747 
  751  C BF474023Ta21P034H08P003B111R1_023.ab1   732 
  771    BF474023Ta21P034H08P003B111F1_023.ab1   771 
  779  C BF474023Ta21P034H08P003B111R1_023.ab1   704 
Contig length: old 1481, new 1482

Contig length: old 1482, new 1482
New start: 0