No. words: 1709; after pruning: 1683


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.4 (1,1:1460)  239  0.40 0.00 0.00  BF474023Td02P034H08P003B111F1_013.ab1      545   792 (0)  C BF474023Td02P034H08P003B111R1_013.ab1   (0)   917   670 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  122 nodes

 63 str. conn. components

Path
    1    BF474023Td02P034H08P003B111F1_013.ab1     1 
  610  C BF474023Td02P034H08P003B111R1_013.ab1   852 
  618    BF474023Td02P034H08P003B111F1_013.ab1   618 
  634  C BF474023Td02P034H08P003B111R1_013.ab1   828 
  638    BF474023Td02P034H08P003B111F1_013.ab1   638 
  650  C BF474023Td02P034H08P003B111R1_013.ab1   812 
  658    BF474023Td02P034H08P003B111F1_013.ab1   658 
  674  C BF474023Td02P034H08P003B111R1_013.ab1   788 
  698    BF474023Td02P034H08P003B111F1_013.ab1   698 
  702  C BF474023Td02P034H08P003B111R1_013.ab1   760 
Contig length: old 1461, new 1461

Contig length: old 1461, new 1461
New start: 0 
S Change at: 573; seg lengths: entry 1, contig 1