No. words: 1714; after pruning: 1688


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.2 (1,1:1443)  253  0.37 0.00 0.74  BF474023Td06P034H08P003B111F1_005.ab1      529   799 (0)  C BF474023Td06P034H08P003B111R1_005.ab1   (0)   915   647 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  128 nodes

 66 str. conn. components

Path
    1    BF474023Td06P034H08P003B111F1_005.ab1     1 
  671  C BF474023Td06P034H08P003B111R1_005.ab1   774 
  699    BF474023Td06P034H08P003B111F1_005.ab1   699 
  703  C BF474023Td06P034H08P003B111R1_005.ab1   742 
Contig length: old 1444, new 1444

Contig length: old 1444, new 1444
New start: 0