No. words: 1839; after pruning: 1785


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.8 (1,1:1481)  339  1.68 0.00 0.00  BF474023Td07P034H08P003B111F1_003.ab1      550   906 (0)  C BF474023Td07P034H08P003B111R1_003.ab1   (0)   933   577 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  164 nodes

 84 str. conn. components

Path
    1    BF474023Td07P034H08P003B111F1_003.ab1     1 
  705  C BF474023Td07P034H08P003B111R1_003.ab1   778 
  709    BF474023Td07P034H08P003B111F1_003.ab1   709 
  713  C BF474023Td07P034H08P003B111R1_003.ab1   770 
  725    BF474023Td07P034H08P003B111F1_003.ab1   725 
  733  C BF474023Td07P034H08P003B111R1_003.ab1   750 
  737    BF474023Td07P034H08P003B111F1_003.ab1   737 
  753  C BF474023Td07P034H08P003B111R1_003.ab1   730 
  761    BF474023Td07P034H08P003B111F1_003.ab1   761 
  777  C BF474023Td07P034H08P003B111R1_003.ab1   706 
Contig length: old 1482, new 1482

Contig length: old 1482, new 1482
New start: 0