No. words: 1215; after pruning: 1175


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 11.9 (1,1:566)  553  0.18 0.00 0.00  BF474092As01P067B05P067B111F1_083.ab1        1   561 (47)  C BF474092As01P067B05P067B111R1_083.ab1   (40)   567     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C BF474092As01P067B05P067B111R1_083.ab1   607 
   44    BF474092As01P067B05P067B111F1_083.ab1     4 
  256  C BF474092As01P067B05P067B111R1_083.ab1   352 
  587    BF474092As01P067B05P067B111F1_083.ab1   547 
Contig length: old 648, new 648

Contig length: old 648, new 648
New start: 0