No. words: 1462; after pruning: 1436


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:565)  545  0.18 0.18 0.35  BF474092Ld02P067B05P067B111F1_089.ab1        1   567 (164)  C BF474092Ld02P067B05P067B111R1_089.ab1   (165)   566     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C BF474092Ld02P067B05P067B111R1_089.ab1   731 
  193    BF474092Ld02P067B05P067B111F1_089.ab1    28 
  197  C BF474092Ld02P067B05P067B111R1_089.ab1   535 
  213    BF474092Ld02P067B05P067B111F1_089.ab1    48 
  237  C BF474092Ld02P067B05P067B111R1_089.ab1   495 
  245    BF474092Ld02P067B05P067B111F1_089.ab1    80 
  577  C BF474092Ld02P067B05P067B111R1_089.ab1   155 
  585    BF474092Ld02P067B05P067B111F1_089.ab1   420 
Contig length: old 896, new 896

Contig length: old 896, new 896
New start: 0