No. words: 1450; after pruning: 1424


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:565)  549  0.18 0.00 0.35  BF474092Ld04P067B05P067B111F1_085.ab1        1   567 (136)  C BF474092Ld04P067B05P067B111R1_085.ab1   (182)   565     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1  C BF474092Ld04P067B05P067B111R1_085.ab1   747 
  262    BF474092Ld04P067B05P067B111F1_085.ab1    80 
  342  C BF474092Ld04P067B05P067B111R1_085.ab1   406 
  574    BF474092Ld04P067B05P067B111F1_085.ab1   392 
Contig length: old 884, new 885

Contig length: old 885, new 885
New start: 0