No. words: 1391; after pruning: 1351


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:550)  545  0.18 0.00 0.00  BF474092Ld07P067B05P067B111F1_094.ab1        1   551 (152)  C BF474092Ld07P067B05P067B111R1_094.ab1   (137)   551     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C BF474092Ld07P067B05P067B111R1_094.ab1   688 
  521    BF474092Ld07P067B05P067B111F1_094.ab1   384 
  565  C BF474092Ld07P067B05P067B111R1_094.ab1   124 
  613    BF474092Ld07P067B05P067B111F1_094.ab1   476 
  617  C BF474092Ld07P067B05P067B111R1_094.ab1    72 
  637    BF474092Ld07P067B05P067B111F1_094.ab1   500 
  641  C BF474092Ld07P067B05P067B111R1_094.ab1    48 
  645    BF474092Ld07P067B05P067B111F1_094.ab1   508 
  653  C BF474092Ld07P067B05P067B111R1_094.ab1    36 
  672    BF474092Ld07P067B05P067B111F1_094.ab1   535 
Contig length: old 840, new 840

Contig length: old 840, new 840
New start: 0