No. words: 1449; after pruning: 1423


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:568)  554  0.00 0.00 0.35  BF474092Ld09P067B05P067B111F1_090.ab1        1   569 (162)  C BF474092Ld09P067B05P067B111R1_090.ab1   (150)   568     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C BF474092Ld09P067B05P067B111R1_090.ab1   718 
  570    BF474092Ld09P067B05P067B111F1_090.ab1   420 
  602  C BF474092Ld09P067B05P067B111R1_090.ab1   117 
  622    BF474092Ld09P067B05P067B111F1_090.ab1   472 
Contig length: old 880, new 881

Contig length: old 881, new 881
New start: 0