No. words: 1438; after pruning: 1412


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:552)  549  0.00 0.00 0.00  BF474092Ld12P067B05P067B111F1_084.ab1        1   553 (179)  C BF474092Ld12P067B05P067B111R1_084.ab1   (153)   553     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C BF474092Ld12P067B05P067B111R1_084.ab1   706 
  209    BF474092Ld12P067B05P067B111F1_084.ab1    56 
  225  C BF474092Ld12P067B05P067B111R1_084.ab1   482 
  301    BF474092Ld12P067B05P067B111F1_084.ab1   148 
Contig length: old 885, new 885

Contig length: old 885, new 885
New start: 0