No. words: 1034; after pruning: 1008


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:463)  458  0.00 0.00 0.00  BF474092Sn31P067B05P116C091F1_007.ab1        1   464 (53)  C BF474092Sn31P067B05P116C091R1_007.ab1   (53)   464     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BF474092Sn31P067B05P116C091R1_007.ab1   517 
   89    BF474092Sn31P067B05P116C091F1_007.ab1    36 
   93  C BF474092Sn31P067B05P116C091R1_007.ab1   425 
  149    BF474092Sn31P067B05P116C091F1_007.ab1    96 
  153  C BF474092Sn31P067B05P116C091R1_007.ab1   365 
  201    BF474092Sn31P067B05P116C091F1_007.ab1   148 
Contig length: old 570, new 570

Contig length: old 570, new 570
New start: 0