No. words: 1037; after pruning: 1011


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:475)  461  0.00 0.00 0.42  BF474092Ta11P067B05P116C091F1_069.ab1        1   477 (38)  C BF474092Ta11P067B05P116C091R1_069.ab1   (47)   475     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BF474092Ta11P067B05P116C091R1_069.ab1   522 
   83    BF474092Ta11P067B05P116C091F1_069.ab1    36 
  119  C BF474092Ta11P067B05P116C091R1_069.ab1   404 
  199    BF474092Ta11P067B05P116C091F1_069.ab1   152 
Contig length: old 561, new 562

Contig length: old 562, new 562
New start: 0