No. words: 1036; after pruning: 1010


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:466)  462  0.00 0.00 0.00  BF474092Ta14P067B05P116C091F1_068.ab1        1   467 (54)  C BF474092Ta14P067B05P116C091R1_068.ab1   (48)   467     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C BF474092Ta14P067B05P116C091R1_068.ab1   515 
  204    BF474092Ta14P067B05P116C091F1_068.ab1   156 
  340  C BF474092Ta14P067B05P116C091R1_068.ab1   176 
  384    BF474092Ta14P067B05P116C091F1_068.ab1   336 
Contig length: old 569, new 569

Contig length: old 569, new 569
New start: 0