No. words: 1049; after pruning: 1023


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.7 (1,1:481)  463  0.00 0.21 0.41  BF474092Ta23P067B05P116C091F1_089.ab1        1   483 (43)  C BF474092Ta23P067B05P116C091R1_089.ab1   (41)   482     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BF474092Ta23P067B05P116C091R1_089.ab1   523 
   87    BF474092Ta23P067B05P116C091F1_089.ab1    45 
   91  C BF474092Ta23P067B05P116C091R1_089.ab1   433 
  203    BF474092Ta23P067B05P116C091F1_089.ab1   161 
  219  C BF474092Ta23P067B05P116C091R1_089.ab1   305 
  415    BF474092Ta23P067B05P116C091F1_089.ab1   373 
Contig length: old 567, new 568

Contig length: old 568, new 568
New start: 0