No. words: 1044; after pruning: 1018


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (1,1:476)  466  0.00 0.00 0.21  BF474092Td05P067B05P116C091F1_075.ab1        1   477 (44)  C BF474092Td05P067B05P116C091R1_075.ab1   (47)   476     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C BF474092Td05P067B05P116C091R1_075.ab1   523 
   83    BF474092Td05P067B05P116C091F1_075.ab1    36 
   91  C BF474092Td05P067B05P116C091R1_075.ab1   433 
  199    BF474092Td05P067B05P116C091F1_075.ab1   152 
  339  C BF474092Td05P067B05P116C091R1_075.ab1   185 
  363    BF474092Td05P067B05P116C091F1_075.ab1   316 
Contig length: old 567, new 568

Contig length: old 568, new 568
New start: 0