No. words: 1686; after pruning: 1660


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.1 (1,1:864)  812  0.24 0.00 0.00  BF474333Ld10P067C05P067C111F1_094.ab1        2   822 (0)  C BF474333Ld10P067C05P067C111R1_094.ab1   (0)   864    44 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  404 nodes

 204 str. conn. components

Path
    1    BF474333Ld10P067C05P067C111F1_094.ab1     1 
  506  C BF474333Ld10P067C05P067C111R1_094.ab1   360 
Contig length: old 865, new 865

Contig length: old 865, new 865
New start: 0 
S Change at: 815; seg lengths: entry 4, contig 4