No. words: 1689; after pruning: 1649


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.7 (1,1:865)  809  0.24 0.00 0.12  BF474333Ld11P067C05P067C111F1_092.ab1        1   823 (0)  C BF474333Ld11P067C05P067C111R1_092.ab1   (1)   865    44 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  404 nodes

 204 str. conn. components

Path
    1  C BF474333Ld11P067C05P067C111R1_092.ab1   866 
    5    BF474333Ld11P067C05P067C111F1_092.ab1     4 
   17  C BF474333Ld11P067C05P067C111R1_092.ab1   850 
   21    BF474333Ld11P067C05P067C111F1_092.ab1    20 
   29  C BF474333Ld11P067C05P067C111R1_092.ab1   838 
   43    BF474333Ld11P067C05P067C111F1_092.ab1    43 
  508  C BF474333Ld11P067C05P067C111R1_092.ab1   359 
Contig length: old 866, new 866

Contig length: old 866, new 866
New start: 0