No. words: 1703; after pruning: 1663


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.3 (1,1:859)  825  0.36 0.00 0.00  BF474333Ld12P067C05P067C111F1_090.ab1        1   835 (0)  C BF474333Ld12P067C05P067C111R1_090.ab1   (8)   860    26 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  412 nodes

 208 str. conn. components

Path
    1  C BF474333Ld12P067C05P067C111R1_090.ab1   868 
   12    BF474333Ld12P067C05P067C111F1_090.ab1     4 
   40  C BF474333Ld12P067C05P067C111R1_090.ab1   829 
   54    BF474333Ld12P067C05P067C111F1_090.ab1    46 
  515  C BF474333Ld12P067C05P067C111R1_090.ab1   354 
  823    BF474333Ld12P067C05P067C111F1_090.ab1   815 
  831  C BF474333Ld12P067C05P067C111R1_090.ab1    38 
Contig length: old 868, new 868

Contig length: old 868, new 868
New start: 0