No. words: 1211; after pruning: 1185


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:471)  465  0.00 0.21 0.00  BF474720Ld06P003D04D10F1_047.ab1        1   472 (151)  C BF474720Ld06P003D04D10R1_047.ab1   (115)   473     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BF474720Ld06P003D04D10R1_047.ab1   588 
  119    BF474720Ld06P003D04D10F1_047.ab1     4 
  123  C BF474720Ld06P003D04D10R1_047.ab1   466 
  127    BF474720Ld06P003D04D10F1_047.ab1    12 
  131  C BF474720Ld06P003D04D10R1_047.ab1   458 
  143    BF474720Ld06P003D04D10F1_047.ab1    27 
  147  C BF474720Ld06P003D04D10R1_047.ab1   442 
  151    BF474720Ld06P003D04D10F1_047.ab1    35 
Contig length: old 739, new 739

Contig length: old 739, new 739
New start: 0